%define type
%name LocusLink 
%color Blue 

%define type
%name PubMed 
%color Red 

%define type
%name TIGR 
%color Green 

%define type
%name Regulatory 
%color Orange 



%define annotation
%type LocusLink
%range 170727 171180 
%label HoxC5 
%url http://www.ncbi.nlm.nih.gov/LocusLink/list.cgi?Q=hoxc5&ORG=&V=0


%define annotation
%type LocusLink
%range 154729 168410 
%label HoxC6
%url http://www.ncbi.nlm.nih.gov/LocusLink/list.cgi?Q=hoxc6&ORG=&V=0
 
%define annotation
%type LocusLink 
%range 146889 148985 
%label HoxC8
%url http://www.ncbi.nlm.nih.gov/LocusLink/list.cgi?Q=hoxc8&ORG=&V=0

%define annotation
%type Regulatory 
%range 143010 143168 
%label enhancer
%summary Comparative studies on mammalian Hoxc8 early enhancer sequence reveal a baleen
whale-specific deletion of a cis-acting element. Shashikant CS, Kim CB, Borbely MA, Wang WC, Ruddle FH. 
Proc Natl Acad Sci U S A. 1998 Dec 22;95(26):15446-51. 
%url http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=9860988&dopt=Abstract
%summary full text
%url http://www.pnas.org/cgi/content/full/95/26/15446

%define annotation
%type Regulatory 
%range 142858 143263 
%label enhancer
%summary Corresponds to mouse sequences, cis-acting elements A,B, C/D, and E are colored Pink.  Combinations of closely situated cis-acting elements determine tissue-specific
patterns and anterior extent of early Hoxc8 expression. Shashikant CS, Ruddle FH. 
Proc Natl Acad Sci U S A. 1996 Oct 29;93(22):12364-9. 
%url http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=8901587&dopt=Abstract
%summary full text
%url http://www.pnas.org/cgi/reprint/93/22/12364
%summary Modification of expression and cis-regulation of Hoxc8 in the evolution of
diverged axial morphology. Belting HG, Shashikant CS, Ruddle FH. Proc Natl Acad Sci U S A. 1998 Mar 3;95(5):2355-60.
%url http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=9482889&dopt=Abstract
%summary full text
%url http://www.pnas.org/cgi/content/full/95/5/2355

%define annotation
%type LocusLink 
%range 137793 140278
%label HoxC9 
%url http://www.ncbi.nlm.nih.gov/LocusLink/list.cgi?Q=hoxc9&ORG=&V=0

%define annotation
%type LocusLink 
%range 122864 127050 
%label HoxC10
%url http://www.ncbi.nlm.nih.gov/LocusLink/list.cgi?Q=hoxc10&ORG=&V=0

%define annotation
%type LocusLink 
%range 110846 113017 
%label HoxC11
%url http://www.ncbi.nlm.nih.gov/LocusLink/list.cgi?Q=hoxc11&ORG=&V=0

%define annotation
%type LocusLink 
%range 92534 94170 
%label HoxC12 
%url http://www.ncbi.nlm.nih.gov/LocusLink/list.cgi?Q=hoxc12&ORG=&V=0 

%define annotation
%type LocusLink 
%range 76511 82860 
%label HoxC13 
%url http://www.ncbi.nlm.nih.gov/LocusLink/list.cgi?Q=hoxc13&ORG=&V=0 
 

%define annotation
%type TIGR 
%range 132811 134362 
%label TIGR cluster 
%url http://www.tigr.org/docs/tigr-scripts/nhgi_scripts/tc_report.pl